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Wed, Jul 01, 2026 9:13 pm

Remove a Flatpak

To see the Flatpaks installed on a Linux system, you can issue the command flatpak list in a terminal window. To remove a Flatpak from a system, find the Application ID of the software by issuing the command flatpak list --app. Once you have the Application ID, you can uninstall the Flatpak with the command flatpak uninstall AppID where AppID is the relevant Application ID. To remove all of the application's local settings and configuration files, add the --delete-data option. E.g., to remove the Bottles Flatpak, I could use the command flatpak uninstall --delete-data com.usebottles.bottles.

alice@Wonderland:~$ flatpak list
Name             Application ID              Version Branch       Installation
Bottles          com.usebottles.bottles      63.2    stable       system
i386             …sktop.Platform.Compat.i386         25.08        system
Mesa             …esktop.Platform.GL.default 26.0.6  25.08        system
Mesa (Extra)     …esktop.Platform.GL.default 26.0.6  25.08-extra  system
nvidia-580-159-… …tform.GL.nvidia-580-159-03         1.4          system
Mesa             …ktop.Platform.GL32.default 26.0.6  25.08        system
Mesa (Extra)     …ktop.Platform.GL32.default 26.0.6  25.08-extra  system
nvidia-580-159-… …orm.GL32.nvidia-580-159-03         1.4          system
Nvidia VAAPI dr… …ktop.Platform.VAAPI.nvidia         25.08        system
Codecs Extra Ex… …ktop.Platform.codecs-extra         25.08-extra  system
i386             …Platform.codecs_extra.i386         25.08-extra  system
GNOME Applicati… org.gnome.Platform                  49           system
Yaru Gtk Theme   org.gtk.Gtk3theme.Yaru              3.22         system
gecko            org.winehq.Wine.gecko               stable-25.08 system
mono             org.winehq.Wine.mono                stable-25.08 system
alice@Wonderland:~$ flatpak list --app
Name        Application ID             Version     Branch     Installation
Bottles     com.usebottles.bottles     63.2        stable     system
alice@Wonderland:~$ flatpak uninstall --delete-data com.usebottles.bottles


        ID                                    Branch         Op
 1. [-] com.usebottles.bottles                stable         r
 2. [-] com.usebottles.bottles.Locale         stable         r

Uninstall complete.
Delete data for com.usebottles.bottles? [y/n]: y
alice@Wonderland:~$

A Flatpack may required shared "runtimes" components. When you delete the application, those runtimes can become "orphaned", but still occupy space on the system. You can, optionally, use the command flatpak uninstall --unused afterwards, if that is a concern.

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